SEED Subsystem: Glycine and Serine Utilization in Shewanella amazonensis SB2B

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Sama_0098
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Sama_2721 gcvT
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Sama_2811
  Sama_2949
  Sama_3039
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) Sama_3228
Glycine cleavage system H protein Sama_2720
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Sama_2719
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) Sama_1325
  Sama_2771
L-serine dehydratase, beta subunit (EC 4.3.1.17) Sama_1325
  Sama_2771
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) Sama_1732
Phosphoserine phosphatase (EC 3.1.3.3) Sama_0978
Serine hydroxymethyltransferase (EC 2.1.2.1) Sama_1014 glyA
Serine transporter Sama_2772
Seryl-tRNA synthetase (EC 6.1.1.11) Sama_1776
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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