SEED Subsystem: Queuosine-Archaeosine Biosynthesis in Rhodospirillum rubrum S1H

Experiments:

Role Gene Name  
COG2047: Uncharacterized protein (ATP-grasp superfamily) No genes
Dihydroneopterin triphosphate pyrophosphohydolase No genes
Dihydroneopterin triphosphate pyrophosphohydolase type 2 No genes
GTP cyclohydrolase I (EC 3.5.4.16) type 1 Rru_A0271
  Rru_A1832
GTP cyclohydrolase I (EC 3.5.4.16) type 2 No genes
Glutamine amidotransferases class-II (GATase) No genes
Hydrolase (HAD superfamily) in cluster with DUF1447 No genes
Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) No genes
NADPH dependent preQ0 reductase No genes
NADPH dependent preQ0 reductase-like No genes
Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Rru_A0395
  Rru_A1742
Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8) No genes
Permease of the drug/metabolite transporter (DMT) superfamily Rru_A0136
  Rru_A0215
  Rru_A0331
  Rru_A0388
  Rru_A0535
  Rru_A2141
  Rru_A2900
  Rru_A3055
  Rru_A3071
  Rru_A3160
  Rru_A3272
  Rru_A3370
  Rru_A3580
Putative preQ0 transporter Rru_A2296
Queuosine Biosynthesis QueC ATPase Rru_A1957
Queuosine Biosynthesis QueE Radical SAM Rru_A1959
Queuosine biosynthesis QueD, PTPS-I No genes
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB Rru_A3639
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) Rru_A0281
Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter No genes
Substrate-specific component STY3230 of queuosine-regulated ECF transporter No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1 No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1 like No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 2 No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 5 No genes
glutamyl-Q-tRNA synthetase Rru_A3734
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1) No genes
tRNA-guanine transglycosylase (EC 2.4.2.29) Rru_A0280

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