SEED Subsystem: tRNA processing in Rhodanobacter denitrificans MT42

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) LRK55_RS03490
Ribonuclease D (EC 3.1.26.3) LRK55_RS15770
Ribonuclease P protein component (EC 3.1.26.5) LRK55_RS08260
Ribonuclease PH (EC 2.7.7.56) LRK55_RS11470
Ribonuclease T (EC 3.1.13.-) LRK55_RS00190
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) LRK55_RS16365
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) LRK55_RS01480
  LRK55_RS06765
  LRK55_RS15640
tRNA pseudouridine synthase B (EC 4.2.1.70) LRK55_RS00810
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase LRK55_RS13465
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) LRK55_RS18110
tRNAHis-5'-guanylyltransferase No genes

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