SEED Subsystem: DNA Repair Base Excision in Ralstonia solanacearum IBSBF1503

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD RALBFv3_RS23990
DNA ligase (EC 6.5.1.2) RALBFv3_RS00345
DNA polymerase I (EC 2.7.7.7) RALBFv3_RS03750
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) RALBFv3_RS20360
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) RALBFv3_RS05260
  RALBFv3_RS15005
Endonuclease III (EC 4.2.99.18) RALBFv3_RS14195
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) RALBFv3_RS07800
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) RALBFv3_RS11125
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) RALBFv3_RS14740
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 RALBFv3_RS06515

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