SEED Subsystem: DNA repair, bacterial in Rahnella sp. WP5

Role	Gene	Name
A/G-specific adenine glycosylase (EC 3.2.2.-)	EX31_RS02735
	EX31_RS11535
ADA regulatory protein	EX31_RS05305
	EX31_RS21655
	EX31_RS22650
Alkylated DNA repair protein AlkB	EX31_RS03140
DNA mismatch repair endonuclease MutH	EX31_RS13210
DNA polymerase IV (EC 2.7.7.7)	EX31_RS21005
DNA polymerase-like protein MT3142	No genes
DNA polymerase-like protein PA0670	No genes
DNA recombination protein RmuC	EX31_RS14630
DNA recombination-dependent growth factor C	EX31_RS21990
DNA repair exonuclease family protein YhaO	No genes
DNA repair protein RadA	EX31_RS04030
DNA repair protein RadC	EX31_RS14470
	EX31_RS22870
DNA repair protein RecN	EX31_RS21760
DNA-damage-inducible protein I	EX31_RS01515
	EX31_RS24380
DNA-damage-inducible protein J	No genes
Endonuclease IV (EC 3.1.21.2)	EX31_RS19060
Endonuclease V (EC 3.1.21.7)	EX31_RS16835
Exodeoxyribonuclease III (EC 3.1.11.2)	EX31_RS06330
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	EX31_RS20455
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	EX31_RS22165
Exonuclease SbcC	EX31_RS22030
Exonuclease SbcD	EX31_RS22035
G:T/U mismatch-specific uracil/thymine DNA-glycosylase	EX31_RS08215
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	EX31_RS04710
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	EX31_RS05305
	EX31_RS08260
	EX31_RS21655
	EX31_RS22650
RecA protein	EX31_RS07800
Recombinational DNA repair protein RecT (prophage associated)	No genes
SOS-response repressor and protease LexA (EC 3.4.21.88)	EX31_RS11845
Single-stranded DNA-binding protein	EX31_RS11995
Very-short-patch mismatch repair endonuclease (G-T specific)	No genes