SEED Subsystem: tRNA processing in Pseudomonas sp. BP01

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) JOY50_RS01365
Ribonuclease D (EC 3.1.26.3) JOY50_RS01555 rnd
Ribonuclease P protein component (EC 3.1.26.5) JOY50_RS08360 rnpA
Ribonuclease PH (EC 2.7.7.56) JOY50_RS09025 rph
Ribonuclease T (EC 3.1.13.-) JOY50_RS14920 rnt
Ribonuclease Z (EC 3.1.26.11) JOY50_RS06655
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) JOY50_RS23735 truD
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) JOY50_RS01950
  JOY50_RS16595 truA
tRNA pseudouridine synthase B (EC 4.2.1.70) JOY50_RS26845 truB
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase No genes
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) JOY50_RS11515 tadA
tRNAHis-5'-guanylyltransferase No genes

Or select organism:

Or view this subsystem at the SEED (slow)