SEED Subsystem: Pyrimidine utilization in Pseudomonas sp. BP01

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) JOY50_RS06660
Dihydropyrimidinase (EC 3.5.2.2) JOY50_RS06670 hydA
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) JOY50_RS06680 preA
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway JOY50_RS06665
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway No genes
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism JOY50_RS06675
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) JOY50_RS06685
  JOY50_RS23310
Uracil permease JOY50_RS19530

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Or view this subsystem at the SEED (slow)