SEED Subsystem: Oxidative stress in Pseudomonas fluorescens SBW25-INTG

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein PFLU_RS05705
  PFLU_RS28845
Catalase (EC 1.11.1.6) PFLU_RS00355
  PFLU_RS09945
  PFLU_RS19005
  PFLU_RS26240
  PFLU_RS27035
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins PFLU_RS16360
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR PFLU_RS25915
Ferroxidase (EC 1.16.3.1) PFLU_RS24120
Fumarate and nitrate reduction regulatory protein PFLU_RS22395
Heme oxygenase HemO, associated with heme uptake PFLU_RS24355
Hydrogen peroxide-inducible genes activator PFLU_RS01370
  PFLU_RS25450
  PFLU_RS29545
Iron-binding ferritin-like antioxidant protein PFLU_RS24120
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) PFLU_RS04370
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps PFLU_RS24120
Organic hydroperoxide resistance protein PFLU_RS08440
Organic hydroperoxide resistance transcriptional regulator PFLU_RS08445
  PFLU_RS08530
Paraquat-inducible protein A PFLU_RS03360
  PFLU_RS03365
  PFLU_RS04615
  PFLU_RS04620
Paraquat-inducible protein B PFLU_RS03370
  PFLU_RS04610
Peroxidase (EC 1.11.1.7) No genes
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) PFLU_RS25130
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR PFLU_RS10090
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) PFLU_RS23805
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR PFLU_RS00375
bacteriophytochrome heme oxygenase BphO PFLU_RS25125
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family PFLU_RS00970
transcriptional regulator, Fur family No genes

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Or view this subsystem at the SEED (slow)