SEED Subsystem: tRNA processing in Phaeobacter inhibens DSM 17395

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) PGA1_c16090
  PGA1_c02370
Ribonuclease D (EC 3.1.26.3) PGA1_c13290
Ribonuclease P protein component (EC 3.1.26.5) PGA1_c02140
Ribonuclease PH (EC 2.7.7.56) PGA1_c35030
Ribonuclease T (EC 3.1.13.-) No genes
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) No genes
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) PGA1_c05650
tRNA pseudouridine synthase B (EC 4.2.1.70) PGA1_c32950
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase PGA1_c04710
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) PGA1_c22010
tRNAHis-5'-guanylyltransferase No genes

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