SEED Subsystem: Thiamin biosynthesis in Phaeobacter inhibens DSM 17395

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) PGA1_c34170
5-FCL-like protein No genes
ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily No genes
Glycine oxidase ThiO (EC 1.4.3.19) PGA1_c09100
Hydroxyethylthiazole kinase (EC 2.7.1.50) No genes
Hydroxymethylpyrimidine ABC transporter, ATPase component PGA1_c28320
Hydroxymethylpyrimidine ABC transporter, substrate-binding component No genes
Hydroxymethylpyrimidine ABC transporter, transmembrane component No genes
Hydroxymethylpyrimidine synthesis protein THI5 No genes
Phosphomethylpyrimidine kinase (EC 2.7.4.7) No genes
Predicted hydroxymethylpyrimidine transporter CytX No genes
Predicted thiamin transporter PnuT No genes
Predicted thiamin transporter ThiT No genes
Predicted thiazole transporter ThiU No genes
Putative cysteine desulfurase, associated with tRNA 4-thiouridine synthase No genes
Rhodanese-like domain required for thiamine synthesis No genes
Substrate-specific component ThiT of thiamin ECF transporter No genes
Substrate-specific component ThiW of predicted thiazole ECF transporter No genes
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Sulfur carrier protein ThiS PGA1_c09090
Sulfur carrier protein adenylyltransferase ThiF PGA1_c22950
Thiamin ABC transporter, ATPase component PGA1_c34030
Thiamin ABC transporter, substrate-binding component PGA1_c34050
Thiamin ABC transporter, transmembrane component PGA1_c34040
Thiamin biosynthesis protein ThiC No genes
Thiamin pyrophosphokinase (EC 2.7.6.2) PGA1_c23790
Thiamin transport gene THI10 No genes
Thiamin-phosphate phosphatase (EC 3.1.3.-) No genes
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) PGA1_c09050
Thiamin-phosphate synthase ThiN (EC 2.5.1.3) No genes
Thiamin-regulated hypothetical deacetylase No genes
Thiamin-regulated outer membrane receptor Omr1 No genes
Thiaminase II (EC 3.5.99.2) No genes
Thiamine kinase (EC 2.7.1.89) No genes
Thiamine-monophosphate kinase (EC 2.7.4.16) No genes
Thiazole biosynthesis protein ThiG PGA1_c09070
Thiazole biosynthesis protein ThiH No genes
Thiazole biosynthetic enzyme Thi4 No genes
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
YjbQ (alternate ThiE) No genes
tRNA S(4)U 4-thiouridine synthase (former ThiI) No genes

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