SEED Subsystem: Ribosome biogenesis bacterial in Phaeobacter inhibens DSM 17395

Experiments:

Role Gene Name  
16S rRNA processing protein RimM PGA1_c00540
Dimethyladenosine transferase (EC 2.1.1.-) No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
LSU m3Psi1915 methyltransferase RlmH PGA1_c29750
LSU m5C1962 methyltransferase RlmI PGA1_c19990
RNA pseudouridylate synthase, group 1 No genes
Ribonuclease E (EC 3.1.26.12) PGA1_c13450
Ribonuclease M5 (EC 3.1.26.8) No genes
Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) PGA1_c33080
Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) PGA1_c01950
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) PGA1_c09000
Ribosomal protein L11 methyltransferase (EC 2.1.1.-) PGA1_c05820
Ribosomal protein S6 glutaminyl transferase No genes
Ribosomal-protein-L7p-serine acetyltransferase No genes
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) PGA1_c03980
Ribosomal-protein-S5p-alanine acetyltransferase PGA1_c06330
Similar to ribosomal large subunit pseudouridine synthase A No genes
Similar to ribosomal large subunit pseudouridine synthase A, group 2 No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type No genes
Similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type No genes
Similar to ribosomal large subunit pseudouridine synthase D, TTE1780-type No genes
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase No genes
tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) PGA1_c00520

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