SEED Subsystem: Oxidative stress in Pedobacter sp. GW460-11-11-14-LB5

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein CA265_RS03115
  CA265_RS06260
  CA265_RS15760
  CA265_RS21370
Catalase (EC 1.11.1.6) CA265_RS00900
  CA265_RS12380
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR CA265_RS14490
Ferroxidase (EC 1.16.3.1) CA265_RS06325
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator CA265_RS19680
Iron-binding ferritin-like antioxidant protein CA265_RS06325
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) CA265_RS19695
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps CA265_RS06325
Organic hydroperoxide resistance protein CA265_RS05585
  CA265_RS09470
Organic hydroperoxide resistance transcriptional regulator No genes
Paraquat-inducible protein A No genes
Paraquat-inducible protein B No genes
Peroxidase (EC 1.11.1.7) CA265_RS00900
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) CA265_RS08760
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) CA265_RS22310
Superoxide dismutase [Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR CA265_RS02115
bacteriophytochrome heme oxygenase BphO CA265_RS08770
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family CA265_RS01350
  CA265_RS08100
  CA265_RS10035
transcriptional regulator, Fur family No genes

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