SEED Subsystem: Glycine and Serine Utilization in Pedobacter sp. GW460-11-11-14-LB5

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) CA265_RS02025
  CA265_RS15280
  CA265_RS20545
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) CA265_RS23960
Cystathionine beta-synthase (EC 4.2.1.22) CA265_RS04375
Cystathionine gamma-lyase (EC 4.4.1.1) CA265_RS06375
  CA265_RS08190
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) CA265_RS09010
  CA265_RS12240
  CA265_RS22635
  CA265_RS23175
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) CA265_RS20885
Glycine cleavage system H protein CA265_RS18980
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) CA265_RS25185
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) CA265_RS21785
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) CA265_RS03895
  CA265_RS09005
Phosphoserine phosphatase (EC 3.1.3.3) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) CA265_RS19165
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) CA265_RS24035
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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