SEED Subsystem: DNA repair, bacterial in Pedobacter sp. GW460-11-11-14-LB5

Experiments:

Role Gene Name  
A/G-specific adenine glycosylase (EC 3.2.2.-) CA265_RS22680
ADA regulatory protein CA265_RS02300
Alkylated DNA repair protein AlkB CA265_RS11950
DNA mismatch repair endonuclease MutH No genes
DNA polymerase IV (EC 2.7.7.7) CA265_RS06545
  CA265_RS24610
DNA polymerase-like protein MT3142 No genes
DNA polymerase-like protein PA0670 CA265_RS11960
  CA265_RS20505
DNA recombination protein RmuC CA265_RS21160
DNA recombination-dependent growth factor C No genes
DNA repair exonuclease family protein YhaO No genes
DNA repair protein RadA CA265_RS22660
DNA repair protein RadC CA265_RS02725
  CA265_RS05730
  CA265_RS11695
  CA265_RS14170
DNA repair protein RecN CA265_RS14855
DNA-damage-inducible protein I No genes
DNA-damage-inducible protein J No genes
Endonuclease IV (EC 3.1.21.2) No genes
Endonuclease V (EC 3.1.21.7) CA265_RS09355
Exodeoxyribonuclease III (EC 3.1.11.2) CA265_RS16670
  CA265_RS21445
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) No genes
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) No genes
Exonuclease SbcC No genes
Exonuclease SbcD No genes
G:T/U mismatch-specific uracil/thymine DNA-glycosylase No genes
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) No genes
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) CA265_RS02300
  CA265_RS03455
RecA protein CA265_RS00600
Recombinational DNA repair protein RecT (prophage associated) No genes
SOS-response repressor and protease LexA (EC 3.4.21.88) No genes
Single-stranded DNA-binding protein CA265_RS02315
  CA265_RS22685
Very-short-patch mismatch repair endonuclease (G-T specific) CA265_RS20205

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