SEED Subsystem: DNA Repair Base Excision in Pseudomonas aeruginosa PA14

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD IKLFDK_10445
DNA ligase (EC 6.5.1.2) IKLFDK_07290
DNA polymerase I (EC 2.7.7.7) IKLFDK_25945
DNA polymerase II (EC 2.7.7.7) IKLFDK_09200
DNA-3-methyladenine glycosylase (EC 3.2.2.20) IKLFDK_05605
  IKLFDK_25510
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) IKLFDK_08130
  IKLFDK_20680
Endonuclease III (EC 4.2.99.18) IKLFDK_17935
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) IKLFDK_02525
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) IKLFDK_23650
Ku domain protein IKLFDK_10520
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) IKLFDK_19015
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 IKLFDK_03200

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Or view this subsystem at the SEED (slow)