SEED Subsystem: TCA Cycle in Shewanella loihica PV-4

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Shew_1655 kgd
Aconitate hydratase (EC 4.2.1.3) No genes
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) Shew_1650 gltA
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Shew_3429
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) Shew_3429
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Shew_1656
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) Shew_1904
Fumarate hydratase class II (EC 4.2.1.2) Shew_0068
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) No genes
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) Shew_2760
Malate dehydrogenase (EC 1.1.1.37) Shew_0867
Malate:quinone oxidoreductase (EC 1.1.5.4) No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Shew_0334
  Shew_1653 sdhA
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Shew_0335 sdhB
  Shew_1654 sdhB
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Shew_1658
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Shew_1657 sucC
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

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Or view this subsystem at the SEED (slow)