SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Shewanella loihica PV-4

Experiments:

Role Gene Name  
ATP-dependent Clp protease ATP-binding subunit ClpA Shew_1566
ATP-dependent Clp protease ATP-binding subunit ClpX Shew_2507 clpX
ATP-dependent Clp protease adaptor protein ClpS Shew_1565
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Shew_2508 clpP
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU Shew_0374 hslU
ATP-dependent protease HslV (EC 3.4.25.-) Shew_0375
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I Shew_2506
ATP-dependent protease La (EC 3.4.21.53) Type II Shew_1818
  Shew_1976
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family Shew_3295
ClpB protein Shew_2948
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease Shew_3296
Outer membrane stress sensor protease DegS Shew_3297

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