SEED Subsystem: Glycine and Serine Utilization in Shewanella loihica PV-4

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Shew_3709
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Shew_3064 gcvT
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Shew_0553
  Shew_0887
  Shew_3196
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) Shew_2534
Glycine cleavage system H protein Shew_3063
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Shew_3062
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) Shew_0740
  Shew_1625
L-serine dehydratase, beta subunit (EC 4.3.1.17) Shew_0740
  Shew_1625
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) Shew_1950
Phosphoserine phosphatase (EC 3.1.3.3) Shew_2810
Serine hydroxymethyltransferase (EC 2.1.2.1) Shew_1185 glyA
Serine transporter Shew_0739
Seryl-tRNA synthetase (EC 6.1.1.11) Shew_2020
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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Or view this subsystem at the SEED (slow)