SEED Subsystem: Denitrification in Shewanella loihica PV-4

Experiments:

Role Gene Name  
Copper-containing nitrite reductase (EC 1.7.2.1) Shew_3335
Cytochrome cd1 nitrite reductase (EC:1.7.2.1) No genes
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) Shew_3331
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) No genes
Nitric oxide reductase activation protein NorD No genes
Nitric oxide reductase activation protein NorE No genes
Nitric oxide reductase activation protein NorQ No genes
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent Shew_0657
Nitric-oxide reductase subunit B (EC 1.7.99.7) No genes
Nitric-oxide reductase subunit C (EC 1.7.99.7) No genes
Nitrite reductase accessory protein NirV No genes
Nitrous oxide reductase maturation periplasmic protein NosX No genes
Nitrous oxide reductase maturation protein NosD Shew_0355
  Shew_3401
Nitrous oxide reductase maturation protein NosF (ATPase) Shew_0356
  Shew_3402
Nitrous oxide reductase maturation protein NosR Shew_3399
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL Shew_0354
  Shew_3404
Nitrous oxide reductase maturation transmembrane protein NosY Shew_0357
  Shew_1616
  Shew_3403
Nitrous-oxide reductase (EC 1.7.99.6) Shew_3400
NnrS protein involved in response to NO Shew_0504
  Shew_2322
NnrT family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes

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