SEED Subsystem: Ammonia assimilation in Shewanella loihica PV-4

Experiments:

Role Gene Name  
Ammonium transporter Shew_0847
Ammonium transporter family No genes
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) Shew_1659
Global nitrogen regulatory protein, CRP family of transcriptional regulators No genes
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Shew_0272
  Shew_0527
  Shew_0528
  Shew_0529
  Shew_1032 gltB
  Shew_1277
  Shew_1336
  Shew_2445
  Shew_2966
  Shew_2984
  Shew_2985
  Shew_3495
  Shew_3592
Glutamate synthase [NADPH] putative GlxC chain (EC 1.4.1.13) No genes
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Shew_1031 gltD
Glutamate synthase, alpha subunit domain protein No genes
Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Shew_0628
Glutamine amidotransferase protein GlxB (EC 2.4.2.-) No genes
Glutamine amidotransferase, class-II No genes
Glutamine synthetase inactivating factor IF17 No genes
Glutamine synthetase inactivating factor IF7 No genes
Glutamine synthetase type I (EC 6.3.1.2) Shew_3554 glnA
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Nitrogen regulation protein NR(I) No genes
Nitrogen regulation protein NR(II) (EC 2.7.3.-) No genes
Nitrogen regulatory protein P-II Shew_0846
  Shew_1110
  Shew_1499
Nitrogen regulatory protein P-II, glnK No genes
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
[Protein-PII] uridylyltransferase (EC 2.7.7.59) Shew_2637
ammonium/methylammonium permease No genes

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