SEED Subsystem: Coenzyme B12 biosynthesis in Dechlorosoma suillum PS

Experiments:

Role Gene Name  
5,6-dimethylbenzimidazole synthase, flavin destructase family No genes
ATPase component CbiO of energizing module of cobalt ECF transporter Dsui_2958
Additional lipoprotein component of predicted cobalamin ECF transporter No genes
Additional substrate-specific component CbiN of cobalt ECF transporter Dsui_2956
Adenosylcobinamide amidohydrolase (EC 3.5.1.90) No genes
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Dsui_0473
Adenosylcobinamide-phosphate synthase No genes
Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) No genes
Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) No genes
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) Dsui_0470
CblX, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblY, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
ChlD component of cobalt chelatase involved in B12 biosynthesis No genes
ChlI component of cobalt chelatase involved in B12 biosynthesis No genes
Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Dsui_0532
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) No genes
Cob(II)alamin reductase No genes
CobN component of cobalt chelatase involved in B12 biosynthesis Dsui_1679
  Dsui_1919
CobW GTPase involved in cobalt insertion for B12 biosynthesis No genes
Cobalamin biosynthesis protein CbiG Dsui_2965
  Dsui_2966
Cobalamin biosynthesis protein CobG No genes
Cobalamin synthase Dsui_0471
Cobalamine-related hypothetical metal-binding protein CrdX No genes
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Dsui_2964
Cobalt-precorrin-3b C17-methyltransferase Dsui_2967
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Dsui_2959
Cobalt-precorrin-6 synthase, anaerobic Dsui_2962
Cobalt-precorrin-6x reductase (EC 1.3.1.54) No genes
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Dsui_2963
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) Dsui_2963
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Dsui_2961
Cobyric acid synthase No genes
Cobyrinic acid A,C-diamide synthase Dsui_0533
Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter No genes
HoxN/HupN/NixA family cobalt transporter No genes
HupE-UreJ family cobalt transporter No genes
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Dsui_0540
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Dsui_0472
Optional hypothetical component of the B12 transporter BtuM No genes
Optional hypothetical component of the B12 transporter BtuN Dsui_2272
Outer membrane vitamin B12 receptor BtuB Dsui_2273
Precorrin-6A synthase (EC 2.1.1.152) No genes
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62) No genes
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73) No genes
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis No genes
Predicted cobalt ABC transporter periplasmic component No genes
Predicted cobalt transporter CbtA No genes
Predicted cobalt transporter CbtC No genes
Predicted cobalt transporter in Bacteroides_Porphyromonas No genes
Predicted cobalt transporter in Mycobacteria No genes
Predicted cobalt transporter in Thermoplasma No genes
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria No genes
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis Dsui_2968
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) Dsui_1827
  Dsui_2960
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) No genes
Substrate-specific component CbiM of cobalt ECF transporter Dsui_2955
Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole No genes
Substrate-specific component CbrT of predicted cobalamin ECF transporter No genes
Threonine kinase in B12 biosynthesis No genes
Transmembrane component CbiQ of energizing module of cobalt ECF transporter Dsui_2957
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter No genes
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Dsui_2969
  Dsui_3319
Vitamin B12 ABC transporter, ATPase component BtuD No genes
Vitamin B12 ABC transporter, B12-binding component BtuF Dsui_0539
Vitamin B12 ABC transporter, permease component BtuC No genes

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Or view this subsystem at the SEED (slow)