SEED Subsystem: DNA Repair Base Excision in Mycobacterium tuberculosis H37Rv

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) Rv0269c
  Rv3062
  Rv3730c
ATP-dependent DNA ligase (EC 6.5.1.1) LigC Rv3731
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Rv0938
DNA ligase (EC 6.5.1.2) Rv3014c
DNA polymerase I (EC 2.7.7.7) Rv1629
  Rv2090
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) Rv1210
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) Rv1688
Endonuclease III (EC 4.2.99.18) Rv3674c
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) Rv0944
  Rv2464c
  Rv2924c
  Rv3297
Ku domain protein Rv0937c
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) No genes
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 Rv2976c

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