SEED Subsystem: Serine-glyoxylate cycle in Desulfovibrio vulgaris Miyazaki F

Role	Gene	Name
3-ketoacyl-CoA thiolase (EC 2.3.1.16)	No genes
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	DvMF_3034
5-FCL-like protein, but predicted not to be 5-formyltetrahydrofolate cyclo-ligase (5-FCL)	No genes
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	DvMF_2318
Acetoacetyl-CoA reductase (EC 1.1.1.36)	No genes
Acetyl-CoA acetyltransferase (EC 2.3.1.9)	No genes
Aconitate hydratase (EC 4.2.1.3)	DvMF_3021
Citrate synthase (EC 2.3.3.1)	No genes
Citrate synthase (si) (EC 2.3.3.1)	No genes
Enolase (EC 4.2.1.11)	DvMF_1810	eno
Formate--tetrahydrofolate ligase (EC 6.3.4.3)	No genes
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	DvMF_2461
	DvMF_2462
Fumarate hydratase class I, anaerobic (EC 4.2.1.2)	No genes
GDSL-like lipase/acylhydrolase	No genes
Glycerate kinase (EC 2.7.1.31)	DvMF_0231
	DvMF_1238
Isocitrate lyase (EC 4.1.3.1)	No genes
Malate dehydrogenase (EC 1.1.1.37)	No genes
Malate synthase-related protein	No genes
Malyl-CoA lyase (EC 4.1.3.24)	No genes
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	DvMF_1809
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	No genes
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	No genes
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9)	No genes
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	DvMF_1809
Methylmalonyl-CoA mutase (EC 5.4.99.2)	No genes
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27)	No genes
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	No genes
Phosphoglyceromutase	No genes
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	No genes
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)	No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425	No genes
Serine hydroxymethyltransferase (EC 2.1.2.1)	DvMF_3097	glyA
Serine--glyoxylate aminotransferase (EC 2.6.1.45)	DvMF_1715
	DvMF_2809
Serine--pyruvate aminotransferase (EC 2.6.1.51)	No genes
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	DvMF_2459
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	DvMF_1127
	DvMF_2460	frdB
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	No genes
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	No genes
crotonyl-CoA reductase	No genes
cytosolic long-chain acyl-CoA thioester hydrolase family protein	No genes
decarboxylase	No genes
isobutyryl-CoA dehydrogenase	No genes
low-specificity D-threonine aldolase	No genes
polyhydroxyalkanoate synthesis repressor PhaR	No genes
putative glycerate kinase	No genes
putative isobutyryl-CoA mutase, chain B	No genes