SEED Subsystem: Folate Biosynthesis in Desulfovibrio vulgaris Miyazaki F

Experiments:

Role Gene Name  
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) DvMF_0362
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) DvMF_2318
5-nucleotidase SurE (EC 3.1.3.5) DvMF_0021
  DvMF_2962
6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) No genes
ATPase component of general energizing module of ECF transporters No genes
Alternative Folylglutamate Synthase No genes
Alternative dihydrofolate reductase 2 No genes
Alternative dihydrofolate reductase 3 No genes
Aminodeoxychorismate lyase (EC 4.1.3.38) DvMF_2314
COG0488: ATPase components of ABC transporters with duplicated ATPase domains DvMF_2379
  DvMF_3061
Dihydrofolate reductase (EC 1.5.1.3) No genes
Dihydrofolate synthase (EC 6.3.2.12) No genes
Dihydroneopterin aldolase (EC 4.1.2.25) No genes
Dihydroneopterin triphosphate epimerase No genes
Dihydroneopterin triphosphate pyrophosphohydolase No genes
Dihydroneopterin triphosphate pyrophosphohydolase type 2 No genes
Dihydropteroate synthase (EC 2.5.1.15) DvMF_0056
FolM Alternative dihydrofolate reductase 1 No genes
Folate biosynthesis protein PTPS-III, catalyzes a reaction that bypasses dihydroneopterin aldolase (FolB) No genes
Folate transporter 3 No genes
Folylpolyglutamate synthase (EC 6.3.2.17) No genes
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
GTP cyclohydrolase I (EC 3.5.4.16) type 1 No genes
GTP cyclohydrolase I (EC 3.5.4.16) type 2 DvMF_1321
Methionyl-tRNA formyltransferase (EC 2.1.2.9) DvMF_2040
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) DvMF_1809
Non functional Dihydropteroate synthase 2 No genes
Nucleoside triphosphate pyrophosphohydrolase MazG No genes
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) DvMF_2316
Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) DvMF_2315
PqqC-like protein No genes
Putative DHNTP pyrophosphatase No genes
Related to Dihydropteroate synthase No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) DvMF_3097 glyA
Substrate-specific component FolT of folate ECF transporter No genes
Thymidine kinase (EC 2.7.1.21) No genes
Thymidylate synthase (EC 2.1.1.45) No genes
Thymidylate synthase thyX (EC 2.1.1.-) DvMF_3206 thyX
Transaldolase (EC 2.2.1.2) DvMF_0364
  DvMF_0741
Transmembrane component of general energizing module of ECF transporters No genes
Xanthosine/inosine triphosphate pyrophosphatase No genes
alternate gene name: yzbB No genes

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