SEED Subsystem: DNA repair, bacterial in Desulfovibrio vulgaris Miyazaki F

Experiments:

Role Gene Name  
A/G-specific adenine glycosylase (EC 3.2.2.-) DvMF_1921
ADA regulatory protein DvMF_1950
Alkylated DNA repair protein AlkB No genes
DNA mismatch repair endonuclease MutH No genes
DNA polymerase IV (EC 2.7.7.7) DvMF_2313
DNA polymerase-like protein MT3142 No genes
DNA polymerase-like protein PA0670 No genes
DNA recombination protein RmuC No genes
DNA recombination-dependent growth factor C No genes
DNA repair exonuclease family protein YhaO No genes
DNA repair protein RadA DvMF_0471
DNA repair protein RadC DvMF_3086
DNA repair protein RecN DvMF_0923
DNA-damage-inducible protein I No genes
DNA-damage-inducible protein J No genes
Endonuclease IV (EC 3.1.21.2) DvMF_0897
Endonuclease V (EC 3.1.21.7) No genes
Exodeoxyribonuclease III (EC 3.1.11.2) DvMF_2456
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DvMF_0122
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DvMF_0124
Exonuclease SbcC No genes
Exonuclease SbcD No genes
G:T/U mismatch-specific uracil/thymine DNA-glycosylase No genes
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) No genes
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DvMF_1950
  DvMF_2272
  DvMF_2818
RecA protein DvMF_0876 recA
Recombinational DNA repair protein RecT (prophage associated) No genes
SOS-response repressor and protease LexA (EC 3.4.21.88) No genes
Single-stranded DNA-binding protein DvMF_0813
Very-short-patch mismatch repair endonuclease (G-T specific) No genes

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