SEED Subsystem: Polyamine Metabolism in Pantoea sp. MT58

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) No genes
Agmatinase (EC 3.5.3.11) IAI47_03665
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD IAI47_09555
  IAI47_16850
Biosynthetic arginine decarboxylase (EC 4.1.1.19) IAI47_03660
Carbamate kinase (EC 2.7.2.2) IAI47_16840
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) IAI47_03545
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion IAI47_15705
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) IAI47_13045
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) IAI47_01310
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) IAI47_13040
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) IAI47_13035
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) IAI47_13030
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A IAI47_15715
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) IAI47_04575
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) No genes
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) No genes
Spermidine synthase (EC 2.5.1.16) IAI47_15710
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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