SEED Subsystem: Oxidative stress in Pantoea sp. MT58

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein IAI47_20230
Catalase (EC 1.11.1.6) IAI47_07215
  IAI47_10610
  IAI47_10635
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR IAI47_13860
Ferroxidase (EC 1.16.3.1) IAI47_13195
Fumarate and nitrate reduction regulatory protein IAI47_09580
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator IAI47_00930
  IAI47_09345
  IAI47_19115
Iron-binding ferritin-like antioxidant protein IAI47_13195
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) IAI47_18725
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR IAI47_02620
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps IAI47_13195
Organic hydroperoxide resistance protein IAI47_18670
Organic hydroperoxide resistance transcriptional regulator IAI47_11110
  IAI47_18675
Paraquat-inducible protein A IAI47_08690
  IAI47_12680
Paraquat-inducible protein B IAI47_08685
  IAI47_12670
  IAI47_12675
Peroxidase (EC 1.11.1.7) IAI47_07215
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR IAI47_17765
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS IAI47_17770
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) IAI47_10745
Superoxide dismutase [Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR IAI47_17875
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family No genes
transcriptional regulator, Fur family No genes

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