SEED Subsystem: tRNA processing in Shewanella oneidensis MR-1

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) SO2580 rnd
Ribonuclease P protein component (EC 3.1.26.5) SO0006 rnpA
Ribonuclease PH (EC 2.7.7.56) SO4256 rph
Ribonuclease T (EC 3.1.13.-) SO2755 rnt
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) SO3436
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) No genes
tRNA pseudouridine synthase B (EC 4.2.1.70) No genes
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase SO1181 miaB
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) SO3291
tRNAHis-5'-guanylyltransferase No genes

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