SEED Subsystem: Transcription initiation, bacterial sigma factors in Shewanella oneidensis MR-1

Experiments:

Role Gene Name  
RNA polymerase heat shock sigma factor SigI No genes
RNA polymerase principal sigma factor HrdA No genes
RNA polymerase principal sigma factor HrdC No genes
RNA polymerase principal sigma factor HrdD No genes
RNA polymerase sigma factor RpoD SO1284 rpoD
RNA polymerase sigma factor RpoE SO1342 rpoE
RNA polymerase sigma factor RpoH SO4583 rpoH
RNA polymerase sigma factor RpoH-related protein No genes
RNA polymerase sigma factor RpoH-related protein RpoH2 No genes
RNA polymerase sigma factor RpoH-related protein RpoH3 No genes
RNA polymerase sigma factor RpoS SO3432 rpoS
RNA polymerase sigma factor SigB No genes
RNA polymerase sigma factor SigV No genes
RNA polymerase sigma factor SigW No genes
RNA polymerase sigma factor SigZ No genes
RNA polymerase sigma factor for flagellar operon SO3210 fliA
RNA polymerase sigma-54 factor RpoN SO3961 rpoN
RNA polymerase sigma-70 factor No genes
RNA polymerase sporulation specific sigma factor SigE No genes
RNA polymerase sporulation specific sigma factor SigF No genes
RNA polymerase sporulation specific sigma factor SigG No genes
RNA polymerase sporulation specific sigma factor SigH No genes
RNA polymerase sporulation specific sigma factor SigK No genes
Serine protease precursor MucD/AlgY associated with sigma factor RpoE No genes
Sigma factor RpoE negative regulatory protein RseA SO1343 rseA
Sigma factor RpoE negative regulatory protein RseB precursor SO1344 rseB
Sigma factor RpoE regulatory protein RseC SO1345 rseC

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Or view this subsystem at the SEED (slow)