SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Shewanella oneidensis MR-1

Experiments:

Role Gene Name  
ATP-dependent Clp protease ATP-binding subunit ClpA SO2626 clpA
ATP-dependent Clp protease ATP-binding subunit ClpX SO1795 clpX
ATP-dependent Clp protease adaptor protein ClpS SO2627
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) SO1794 clpP
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU SO4163 hslU
ATP-dependent protease HslV (EC 3.4.25.-) SO4162 hslV
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I SO1796 lon
ATP-dependent protease La (EC 3.4.21.53) Type II SO1857
  SO3391
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family SO3941
ClpB protein SO3577 clpB
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease SO3942
Outer membrane stress sensor protease DegS SO3943 degS

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