SEED Subsystem: Glycine and Serine Utilization in Shewanella oneidensis MR-1

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) SO4674 kbl
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) SO0779 gcvT
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) SO0585
  SO0862 serA
  SO3631 hprA
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) SO0505
  SO1770
  SO4577
Glycine cleavage system H protein SO0780 gcvH
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) SO0781 gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) SO2248 sdaA
L-serine dehydratase, beta subunit (EC 4.3.1.17) SO2248 sdaA
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) SO2410 serC
Phosphoserine phosphatase (EC 3.1.3.3) SO_1223 serB
Serine hydroxymethyltransferase (EC 2.1.2.1) SO3471 glyA
Serine transporter SO0919
Seryl-tRNA synthetase (EC 6.1.1.11) SO2310 serS
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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