SEED Subsystem: DNA Repair Base Excision in Lysobacter sp. OAE881

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC ABIE51_RS03755
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD ABIE51_RS12760
  ABIE51_RS12790
DNA ligase (EC 6.5.1.2) ABIE51_RS08890
DNA polymerase I (EC 2.7.7.7) ABIE51_RS02010
  ABIE51_RS05515
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) ABIE51_RS16035
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) ABIE51_RS14570
  ABIE51_RS14735
Endonuclease III (EC 4.2.99.18) ABIE51_RS07560
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) ABIE51_RS12700
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) ABIE51_RS00335
Ku domain protein ABIE51_RS12785
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) No genes
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 ABIE51_RS02100

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