SEED Subsystem: Arginine and Ornithine Degradation in Klebsiella michiganensis M5al

Experiments:

Role Gene Name  
Agmatinase (EC 3.5.3.11) BWI76_RS21880
  BWI76_RS21925
  BWI76_RS24025
Agmatine deiminase (EC 3.5.3.12) No genes
Arginase (EC 3.5.3.1) No genes
Arginine ABC transporter, ATP-binding protein ArtP BWI76_RS09520
Arginine ABC transporter, periplasmic arginine-binding protein ArtI BWI76_RS02485
  BWI76_RS09515
Arginine ABC transporter, periplasmic arginine-binding protein ArtJ BWI76_RS09500
  BWI76_RS21895
Arginine ABC transporter, permease protein ArtM BWI76_RS09505
Arginine ABC transporter, permease protein ArtQ BWI76_RS09510
Arginine N-succinyltransferase (EC 2.3.1.109) BWI76_RS11675
Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) No genes
Arginine N-succinyltransferase, beta subunit (EC 2.3.1.109) No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine deiminase (EC 3.5.3.6) No genes
Arginine pathway regulatory protein ArgR, repressor of arg regulon BWI76_RS25425
Arginine permease RocE No genes
Arginine utilization protein RocB No genes
Arginine utilization regulatory protein RocR No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine ABC transporter, ATP-binding protein AotP No genes
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein No genes
Arginine/ornithine ABC transporter, permease protein AotM No genes
Arginine/ornithine ABC transporter, permease protein AotQ No genes
Arginine/ornithine antiporter ArcD BWI76_RS16225
Biosynthetic arginine decarboxylase (EC 4.1.1.19) BWI76_RS24030
Carbamate kinase (EC 2.7.2.2) BWI76_RS07060
  BWI76_RS17520
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) BWI76_RS10795
Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) BWI76_RS20320
Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) BWI76_RS07345
  BWI76_RS14410
  BWI76_RS19240
  BWI76_RS20335
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) BWI76_RS19230
  BWI76_RS20325
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) BWI76_RS19235
  BWI76_RS20330
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) BWI76_RS10285
  BWI76_RS20340
N-carbamoylputrescine amidase (3.5.1.53) No genes
NADP-specific glutamate dehydrogenase (EC 1.4.1.4) BWI76_RS11610
Ornithine aminotransferase (EC 2.6.1.13) No genes
Ornithine carbamoyltransferase (EC 2.1.3.3) BWI76_RS03010
Ornithine cyclodeaminase (EC 4.3.1.12) No genes
Ornithine decarboxylase (EC 4.1.1.17) BWI76_RS24175
Putrescine aminotransferase (EC 2.6.1.82) BWI76_RS24630
Succinylarginine dihydrolase (EC 3.5.3.23) BWI76_RS11685
Succinylglutamate desuccinylase (EC 3.5.1.96) BWI76_RS11690
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) BWI76_RS11680
Succinylornithine transaminase (EC 2.6.1.81) BWI76_RS11670
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family No genes
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes

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