SEED Subsystem: Experimental tye in Sphingomonas koreensis DSMZ 15582

Experiments:

Role Gene Name  
2H phosphoesterase superfamily protein Bsu1186 (yjcG) No genes
5-aminolevulinate synthase (EC 2.3.1.37) Ga0059261_2444
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog No genes
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) Ga0059261_3217
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 No genes
Cytochrome c-type biogenesis protein CcdA (DsbD analog) No genes
Cytochrome c-type biogenesis protein CcsA/ResC No genes
DUF1801 domain-containing protein No genes
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Ga0059261_1452
GNAT family acetyltransferase YjcF No genes
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) No genes
Glutamyl-tRNA reductase (EC 1.2.1.70) No genes
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase No genes
Homolog of E. coli HemY protein No genes
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly No genes
Hypothetical protein Q, similar to Chlorite dismutase No genes
Hypothetical protein SAV1831 No genes
Hypothetical protein SAV1869 No genes
Hypothetical protein, ydbS homolog No genes
Hypothetical protein, ydbT homolog No genes
Hypothetical, related to broad specificity phosphatases COG0406 No genes
Methyltransferase (EC 2.1.1.-) colocalized with Q No genes
Periplasmic/membrane protein associated with DUF414 No genes
Porphobilinogen deaminase (EC 2.5.1.61) Ga0059261_2161
Porphobilinogen synthase (EC 4.2.1.24) Ga0059261_0634
Possibly related to ydbT No genes
Precorrin-2 oxidase (EC 1.3.1.76) Ga0059261_2052
Protein of unknown function DUF414 No genes
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) No genes
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) No genes
Putative acetyl esterase YjcH (EC 3.1.1.-) No genes
Putative lipoprotein SAV1865 No genes
Putative membrane protein Q2 colocalized with Q No genes
Putative nitroreductase family protein SACOL0874 No genes
Putative oxidoreductase ferredoxin-type protein, clusters with CPO No genes
Ribonuclease D (EC 3.1.26.3) Ga0059261_0222
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) No genes
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) Ga0059261_2052
Small hypothetical protein Hyp1 No genes
Sua5 YciO YrdC YwlC family protein No genes
Uncharacterized SAV1743 homolog No genes
Uncharacterized protein Q1 colocalized with Q No genes
Uncharacterized protein UPF0344 No genes
Uncharacterized protein, homolog of B.subtilis yhgC No genes
Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Ga0059261_2197
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Ga0059261_2052
Uroporphyrinogen-III synthase (EC 4.2.1.75) Ga0059261_2162
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) No genes
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) No genes
transmembrane protein, distant homology with ydbS No genes
transmembrane protein, distant homology with ydbT No genes

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