SEED Subsystem: TCA Cycle in Herbaspirillum seropedicae SmR1

Role	Gene	Name
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	HSERO_RS14885
Aconitate hydratase (EC 4.2.1.3)	No genes
Aconitate hydratase 2 (EC 4.2.1.3)	No genes
Aconitate hydratase X, predicted	No genes
Aconitate hydratase large subunit (EC 4.2.1.3)	No genes
Aconitate hydratase small subunit (EC 4.2.1.3)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	No genes
Citrate synthase (si) (EC 2.3.3.1)	HSERO_RS06380
	HSERO_RS14890
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	HSERO_RS14875
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	HSERO_RS07315
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	HSERO_RS14880
Fumarate hydratase class I (EC 4.2.1.2)	No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	HSERO_RS07760
Fumarate hydratase class II (EC 4.2.1.2)	HSERO_RS07610
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	HSERO_RS07015
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)	No genes
Malate dehydrogenase (EC 1.1.1.37)	HSERO_RS14925
	HSERO_RS16685
Malate:quinone oxidoreductase (EC 1.1.5.4)	HSERO_RS21125
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425	No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	HSERO_RS14905
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	HSERO_RS14900
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	HSERO_RS03285
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	HSERO_RS03280
Transcriptional regulator of succinyl CoA synthetase operon	No genes
hypothetical protein that often co-occurs with aconitase	No genes