SEED Subsystem: tRNA processing in Escherichia coli Nissle 1917

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) ECOLIN_RS10035
Ribonuclease P protein component (EC 3.1.26.5) ECOLIN_RS21330
Ribonuclease PH (EC 2.7.7.56) ECOLIN_RS20755
Ribonuclease T (EC 3.1.13.-) ECOLIN_RS09210
Ribonuclease Z (EC 3.1.26.11) ECOLIN_RS13205
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) ECOLIN_RS15350
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) ECOLIN_RS13435
tRNA pseudouridine synthase B (EC 4.2.1.70) ECOLIN_RS18185
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase ECOLIN_RS03555
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) ECOLIN_RS14480
tRNAHis-5'-guanylyltransferase No genes

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