SEED Subsystem: Pyrimidine utilization in Escherichia coli Nissle 1917

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) No genes
Dihydropyrimidinase (EC 3.5.2.2) No genes
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) ECOLIN_RS12565
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway ECOLIN_RS05265
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway ECOLIN_RS05275
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway ECOLIN_RS05255
  ECOLIN_RS26450
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway ECOLIN_RS05280
Predicted reductase RutE in novel pyrimidine catabolism pathway ECOLIN_RS05260
  ECOLIN_RS26445
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) ECOLIN_RS05285
Uracil permease ECOLIN_RS05250
  ECOLIN_RS14180
  ECOLIN_RS26455

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Or view this subsystem at the SEED (slow)