SEED Subsystem: TCA Cycle in Desulfovibrio vulgaris Hildenborough JW710

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) No genes
Aconitate hydratase (EC 4.2.1.3) DVU1064 aco
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) DVU1423 lpdA
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) No genes
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) DVU3264
  DVU3265
Fumarate hydratase class II (EC 4.2.1.2) DVU0080 fumC
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) DVU0477 icd
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) No genes
Malate dehydrogenase (EC 1.1.1.37) No genes
Malate:quinone oxidoreductase (EC 1.1.5.4) No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) DVU3262 fdrA
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) DVU2674 sdhB
  DVU3263 frdB
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

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