SEED Subsystem: Nitrogen fixation in Desulfovibrio vulgaris Hildenborough JW710

Experiments:

Role Gene Name  
4Fe-4S ferredoxin, nitrogenase-associated No genes
AnfO protein, required for Mo- and V-independent nitrogenase No genes
AnfR protein, required for Mo- and V-independent nitrogenase No genes
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily DVU0664
Homocitrate synthase (EC 2.3.3.14) No genes
Homocitrate synthase alpha subunit (EC 2.3.3.14) No genes
Homocitrate synthase omega subunit (EC 2.3.3.14) No genes
Iron-sulfur cluster assembly scaffold protein NifU DVU0665
LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis No genes
NifB-domain protein, type 2 No genes
NifM protein No genes
NifT protein No genes
NifX-associated protein No genes
NifY protein No genes
NifZ protein No genes
Nitrogenase (iron-iron) alpha chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) beta chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) delta chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) reductase and maturation protein AnfH No genes
Nitrogenase (iron-iron) transcriptional regulator No genes
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) DVUA0012 nifD
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) No genes
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH DVUA0015 nifH
Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA DVU1949 nifA-1
  DVUA0143 nifA-2
Nitrogenase (vanadium-iron) alpha chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) beta chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) delta chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) reductase and maturation protein VnfH No genes
Nitrogenase (vanadium-iron) transcriptional regulator VnfA No genes
Nitrogenase FeMo-cofactor carrier protein NifX No genes
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE DVUA0009 nifE
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN DVUA0011 nifK
  DVUA0008 nifN
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB DVUA0007 nifB
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ No genes
Nitrogenase cofactor carrier protein NafY No genes
Nitrogenase stabilizing/protective protein NifW No genes
Nitrogenase vanadium-cofactor synthesis protein VnfE No genes
Nitrogenase vanadium-cofactor synthesis protein VnfN No genes
Nitrogenase vanadium-cofactor synthesis protein VnfX No genes
Nitrogenase vanadium-cofactor synthesis protein VnfY No genes
Nitrogenase-associated protein NifO No genes
Transcriptional repressor of nif and glnA operons No genes
probable iron binding protein from the HesB_IscA_SufA family in Nif operon No genes

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Or view this subsystem at the SEED (slow)