SEED Subsystem: TCA Cycle in Dinoroseobacter shibae DFL-12

Role	Gene	Name
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Dshi_2883
Aconitate hydratase (EC 4.2.1.3)	Dshi_1851
Aconitate hydratase 2 (EC 4.2.1.3)	Dshi_2060
Aconitate hydratase X, predicted	No genes
Aconitate hydratase large subunit (EC 4.2.1.3)	No genes
Aconitate hydratase small subunit (EC 4.2.1.3)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	No genes
Citrate synthase (si) (EC 2.3.3.1)	Dshi_1806
	Dshi_3119
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Dshi_2886
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	Dshi_1811
	Dshi_1966
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Dshi_2884
Fumarate hydratase class I (EC 4.2.1.2)	No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	Dshi_1426
Fumarate hydratase class II (EC 4.2.1.2)	Dshi_2334
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	No genes
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)	No genes
Malate dehydrogenase (EC 1.1.1.37)	Dshi_2546
	Dshi_2876
Malate:quinone oxidoreductase (EC 1.1.5.4)	No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425	No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Dshi_2865
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Dshi_2861
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Dshi_2492
	Dshi_2882
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Dshi_2491
	Dshi_2878
Transcriptional regulator of succinyl CoA synthetase operon	No genes
hypothetical protein that often co-occurs with aconitase	Dshi_1850