SEED Subsystem: Pyrimidine utilization in Dinoroseobacter shibae DFL-12

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) Dshi_1367
Dihydropyrimidinase (EC 3.5.2.2) Dshi_1370
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) Dshi_1363
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway No genes
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Dshi_1362
Pyrimidine ABC transporter, ATP-binding protein Dshi_1371
Pyrimidine ABC transporter, substrate-binding component Dshi_1374
Pyrimidine ABC transporter, transmembrane component 1 Dshi_1372
  Dshi_1373
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) Dshi_1365
Uracil permease No genes

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Or view this subsystem at the SEED (slow)