SEED Subsystem: DNA repair, bacterial in Dinoroseobacter shibae DFL-12

Role	Gene	Name
A/G-specific adenine glycosylase (EC 3.2.2.-)	Dshi_0028
ADA regulatory protein	Dshi_3024
Alkylated DNA repair protein AlkB	Dshi_3572
DNA mismatch repair endonuclease MutH	No genes
DNA polymerase IV (EC 2.7.7.7)	Dshi_0385
DNA polymerase-like protein MT3142	No genes
DNA polymerase-like protein PA0670	No genes
DNA recombination protein RmuC	Dshi_0364
DNA recombination-dependent growth factor C	No genes
DNA repair exonuclease family protein YhaO	No genes
DNA repair protein RadA	Dshi_2129
DNA repair protein RadC	Dshi_3569
DNA repair protein RecN	Dshi_2413
DNA-damage-inducible protein I	No genes
DNA-damage-inducible protein J	No genes
Endonuclease IV (EC 3.1.21.2)	No genes
Endonuclease V (EC 3.1.21.7)	No genes
Exodeoxyribonuclease III (EC 3.1.11.2)	Dshi_0036
	Dshi_1886
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	Dshi_2727
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	Dshi_3296
Exonuclease SbcC	No genes
Exonuclease SbcD	No genes
G:T/U mismatch-specific uracil/thymine DNA-glycosylase	No genes
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	No genes
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Dshi_3024
RecA protein	Dshi_1643
Recombinational DNA repair protein RecT (prophage associated)	No genes
SOS-response repressor and protease LexA (EC 3.4.21.88)	Dshi_1803
Single-stranded DNA-binding protein	Dshi_1606
Very-short-patch mismatch repair endonuclease (G-T specific)	No genes