SEED Subsystem: DNA-replication in Dinoroseobacter shibae DFL-12

Role	Gene	Name
ATP-dependent DNA helicase RecG (EC 3.6.1.-)	Dshi_1510
ATP-dependent DNA helicase RecQ	Dshi_3334
Arrested fork binding	No genes
Chromosomal replication initiator protein DnaA	Dshi_0741
	Dshi_3373
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	Dshi_1103
DNA polymerase I (EC 2.7.7.7)	Dshi_2909
	Dshi_3653
DNA polymerase II (EC 2.7.7.7)	Dshi_0055
DNA polymerase III alpha subunit (EC 2.7.7.7)	Dshi_0102
	Dshi_2425
	Dshi_2732
	Dshi_2957
DNA polymerase III beta subunit (EC 2.7.7.7)	Dshi_3374
DNA polymerase III chi subunit (EC 2.7.7.7)	Dshi_1192
DNA polymerase III delta prime subunit (EC 2.7.7.7)	Dshi_0921
DNA polymerase III delta subunit (EC 2.7.7.7)	No genes
DNA polymerase III epsilon subunit (EC 2.7.7.7)	Dshi_3448
	Dshi_3559
DNA polymerase III psi subunit (EC 2.7.7.7)	No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	Dshi_0650
DNA polymerase III theta subunit (EC 2.7.7.7)	No genes
DNA primase (EC 2.7.7.-)	Dshi_2262
DNA primase (EC 2.7.7.-), phage-associated	No genes
DNA primase TraC (EC 2.7.7.-)	No genes
DNA repair protein RecN	Dshi_2413
DNA replication protein DnaC	No genes
DNA replication terminus site-binding protein	No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication	Dshi_1926
Helicase loader DnaI	No genes
Holliday junction DNA helicase RuvA	Dshi_1104
Holliday junction DNA helicase RuvB	Dshi_1105
Primosomal protein I	No genes
Primosomal replication protein N	No genes
Primosomal replication protein N prime prime	No genes
RecA protein	Dshi_1643
Recombination protein RecR	Dshi_0648
Replicative DNA helicase (EC 3.6.1.-)	Dshi_2373
Replicative DNA helicase (EC 3.6.1.-) [SA14-24]	No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	Dshi_2275
Transcription-repair coupling factor	Dshi_1561