SEED Subsystem: D-ribose utilization in Dinoroseobacter shibae DFL-12

Experiments:

Role Gene Name  
Predicted nucleoside ABC transporter, ATP-binding component Dshi_2843
Predicted nucleoside ABC transporter, permease 1 component Dshi_2844
Predicted nucleoside ABC transporter, permease 2 component Dshi_2846
Predicted nucleoside ABC transporter, substrate-binding component Dshi_2842
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) Dshi_1976
Ribose 5-phosphate isomerase A (EC 5.3.1.6) Dshi_2738
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Dshi_0519
  Dshi_0530
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) No genes
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Dshi_0531
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Dshi_0518
  Dshi_0528
  Dshi_0529
  Dshi_1423
  Dshi_1424
Ribose operon repressor No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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