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SEED Subsystem: Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate in
Cupriavidus basilensis FW507-4G11
Experiments:
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Role
Gene
Name
Acetaldehyde dehydrogenase (
EC 1.2.1.10
)
No genes
Acetate kinase (
EC 2.7.2.1
)
RR42
_RS03800
Acetate permease ActP (cation/acetate symporter)
RR42
_RS06400
RR42
_RS13875
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
RR42
_RS23455
RR42
_RS28040
RR42
_RS31770
RR42
_RS36295
RR42
_RS37035
Acetyl-CoA synthetase (ADP-forming) alpha chain (
EC 6.2.1.13
)
RR42
_RS31360
Acetyl-CoA synthetase (ADP-forming) beta chain (
EC 6.2.1.13
)
No genes
Acetyl-coenzyme A synthetase (
EC 6.2.1.1
)
RR42
_RS06210
RR42
_RS10650
RR42
_RS13880
RR42
_RS24890
RR42
_RS29035
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
No genes
Acylphosphate phosphohydrolase (
EC 3.6.1.7
), putative
RR42
_RS18325
Aldehyde dehydrogenase (
EC 1.2.1.3
)
RR42
_RS04280
RR42
_RS11360
RR42
_RS13660
RR42
_RS21485
RR42
_RS24065
RR42
_RS24390
RR42
_RS24840
RR42
_RS25005
RR42
_RS25010
RR42
_RS26255
RR42
_RS27780
RR42
_RS29955
RR42
_RS32140
RR42
_RS34255
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (
EC 2.3.1.12
)
RR42
_RS07370
RR42
_RS21775
RR42
_RS26120
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (
EC 1.8.1.4
)
RR42
_RS07380
RR42
_RS21770
RR42
_RS26115
Lactate 2-monooxygenase (
EC 1.13.12.4
)
No genes
NAD-dependent protein deacetylase of SIR2 family
RR42
_RS13055
RR42
_RS27705
NAD-independent protein deacetylase AcuC
No genes
Phosphate acetyltransferase (
EC 2.3.1.8
)
RR42
_RS03805
RR42
_RS33690
Protein acetyltransferase
RR42
_RS01345
RR42
_RS09770
Putative membrane protein, clustering with ActP
RR42
_RS06405
Pyruvate decarboxylase (
EC 4.1.1.1
)
No genes
Pyruvate dehydrogenase E1 component (
EC 1.2.4.1
)
RR42
_RS07365
RR42
_RS24415
RR42
_RS26125
RR42
_RS29920
RR42
_RS32980
RR42
_RS34220
Pyruvate dehydrogenase E1 component alpha subunit (
EC 1.2.4.1
)
No genes
Pyruvate dehydrogenase E1 component beta subunit (
EC 1.2.4.1
)
No genes
Pyruvate oxidase (
EC 1.2.3.3
)
No genes
Pyruvate oxidase [ubiquinone, cytochrome] (
EC 1.2.2.2
)
No genes
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC101
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthomonas campestris pv. campestris strain 8004
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