SEED Subsystem: Oxidative stress in Cupriavidus basilensis FW507-4G11

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein RR42_RS15405
  RR42_RS32715
Catalase (EC 1.11.1.6) RR42_RS16550
  RR42_RS17380
  RR42_RS26270
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR RR42_RS17560
  RR42_RS37270
Ferroxidase (EC 1.16.3.1) RR42_RS17370
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator RR42_RS17385
  RR42_RS19770
  RR42_RS23165
  RR42_RS27970
Iron-binding ferritin-like antioxidant protein RR42_RS17370
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) No genes
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR RR42_RS08875
  RR42_RS09180
NnrS protein involved in response to NO RR42_RS09195
Non-specific DNA-binding protein Dps RR42_RS17370
Organic hydroperoxide resistance protein RR42_RS22590
Organic hydroperoxide resistance transcriptional regulator RR42_RS22585
Paraquat-inducible protein A RR42_RS03890
  RR42_RS03895
Paraquat-inducible protein B RR42_RS03885
Peroxidase (EC 1.11.1.7) RR42_RS16550
  RR42_RS26270
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) RR42_RS15955
Superoxide dismutase [Fe] (EC 1.15.1.1) RR42_RS03480
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) RR42_RS25690
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR RR42_RS01045
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family RR42_RS01620
  RR42_RS04050
  RR42_RS12875
  RR42_RS25385
  RR42_RS25550
  RR42_RS27910
  RR42_RS28775
  RR42_RS29000
  RR42_RS35040
transcriptional regulator, Fur family No genes

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