SEED Subsystem: Experimental tye in Cupriavidus basilensis FW507-4G11

Experiments:

Role Gene Name  
2H phosphoesterase superfamily protein Bsu1186 (yjcG) No genes
5-aminolevulinate synthase (EC 2.3.1.37) No genes
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog No genes
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) RR42_RS04725
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) RR42_RS20025
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 No genes
Cytochrome c-type biogenesis protein CcdA (DsbD analog) RR42_RS35610
Cytochrome c-type biogenesis protein CcsA/ResC RR42_RS19080
DUF1801 domain-containing protein No genes
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) RR42_RS05925
GNAT family acetyltransferase YjcF RR42_RS10950
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) RR42_RS04235
  RR42_RS15790
Glutamyl-tRNA reductase (EC 1.2.1.70) RR42_RS18465
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase No genes
Homolog of E. coli HemY protein No genes
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly No genes
Hypothetical protein Q, similar to Chlorite dismutase No genes
Hypothetical protein SAV1831 No genes
Hypothetical protein SAV1869 No genes
Hypothetical protein, ydbS homolog No genes
Hypothetical protein, ydbT homolog No genes
Hypothetical, related to broad specificity phosphatases COG0406 No genes
Methyltransferase (EC 2.1.1.-) colocalized with Q No genes
Periplasmic/membrane protein associated with DUF414 No genes
Porphobilinogen deaminase (EC 2.5.1.61) RR42_RS15900
Porphobilinogen synthase (EC 4.2.1.24) RR42_RS19100
Possibly related to ydbT No genes
Precorrin-2 oxidase (EC 1.3.1.76) No genes
Protein of unknown function DUF414 No genes
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) No genes
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) No genes
Putative acetyl esterase YjcH (EC 3.1.1.-) No genes
Putative lipoprotein SAV1865 No genes
Putative membrane protein Q2 colocalized with Q No genes
Putative nitroreductase family protein SACOL0874 No genes
Putative oxidoreductase ferredoxin-type protein, clusters with CPO No genes
Ribonuclease D (EC 3.1.26.3) No genes
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) RR42_RS16240
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) No genes
Small hypothetical protein Hyp1 No genes
Sua5 YciO YrdC YwlC family protein No genes
Uncharacterized SAV1743 homolog No genes
Uncharacterized protein Q1 colocalized with Q No genes
Uncharacterized protein UPF0344 No genes
Uncharacterized protein, homolog of B.subtilis yhgC No genes
Uroporphyrinogen III decarboxylase (EC 4.1.1.37) RR42_RS20135
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) RR42_RS16245
Uroporphyrinogen-III synthase (EC 4.2.1.75) RR42_RS15895
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) No genes
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) No genes
transmembrane protein, distant homology with ydbS No genes
transmembrane protein, distant homology with ydbT No genes

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