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SEED Subsystem: Butanol Biosynthesis in
Cupriavidus basilensis FW507-4G11
Experiments:
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Role
Gene
Name
3-hydroxybutyryl-CoA dehydrogenase (
EC 1.1.1.157
)
RR42
_RS01610
RR42
_RS24305
RR42
_RS33580
Acetaldehyde dehydrogenase (acetylating) (
EC 1.2.1.10
)
No genes
Acetyl-CoA acetyltransferase (
EC 2.3.1.9
)
RR42
_RS24970
RR42
_RS28055
Butyryl-CoA dehydrogenase (
EC 1.3.99.2
)
RR42
_RS11345
RR42
_RS13540
RR42
_RS16575
RR42
_RS16795
RR42
_RS21420
RR42
_RS23155
RR42
_RS24795
RR42
_RS24965
RR42
_RS25105
RR42
_RS25970
RR42
_RS28565
RR42
_RS28610
RR42
_RS29500
RR42
_RS31105
RR42
_RS31905
RR42
_RS31910
RR42
_RS31925
RR42
_RS31930
RR42
_RS36460
RR42
_RS36490
Enoyl-CoA hydratase (
EC 4.2.1.17
)
RR42
_RS00730
RR42
_RS02510
RR42
_RS02525
RR42
_RS03015
RR42
_RS04550
RR42
_RS05755
RR42
_RS10250
RR42
_RS10265
RR42
_RS10270
RR42
_RS11095
RR42
_RS12500
RR42
_RS12795
RR42
_RS13545
RR42
_RS16175
RR42
_RS16790
RR42
_RS18250
RR42
_RS19805
RR42
_RS22630
RR42
_RS22680
RR42
_RS23295
RR42
_RS23450
RR42
_RS23710
RR42
_RS24355
RR42
_RS24895
RR42
_RS25480
RR42
_RS25525
RR42
_RS25900
RR42
_RS28050
RR42
_RS28325
RR42
_RS28330
RR42
_RS29425
RR42
_RS29465
RR42
_RS29940
RR42
_RS29945
RR42
_RS31580
RR42
_RS31935
RR42
_RS31945
RR42
_RS34175
RR42
_RS34180
RR42
_RS34905
RR42
_RS35270
RR42
_RS36495
NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)
No genes
NADH-dependent butanol dehydrogenase B (EC 1.1.1.-)
No genes
NADPH-dependent butanol dehydrogenase (EC 1.1.1.-)
No genes
Pyruvate formate-lyase (
EC 2.3.1.54
)
No genes
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC101
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthomonas campestris pv. campestris strain 8004
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