SEED Subsystem: Xylose utilization in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name  
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) No genes
Acetyl xylan esterase (EC 3.1.1.41) No genes
Acetyl xylan esterase XylU (EC 3.1.1.41) No genes
Alpha-xylosidase (EC 3.2.1.-) No genes
Beta-xylosidase (EC 3.2.1.37) No genes
D-xylose 1-dehydrogenase (EC 1.1.1.175) ABZR87_RS18235
D-xylose proton-symporter XylE No genes
D-xylose proton-symporter XylT No genes
D-xylose transport ATP-binding protein XylG ABZR87_RS18225
  ABZR87_RS23220
D-xylose-specific 1-epimerase (mutarotase) ABZR87_RS18210
Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) No genes
Endo-1,4-beta-xylanase B ( EC 3.2.1.8 ) No genes
Endo-1,4-beta-xylanase C precursor (EC 3.2.1.8) No genes
NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) No genes
Novel Xylose regulator from LacI family No genes
Phosphotransferase system for xylose-containing disaccharide, EIIA component No genes
Phosphotransferase system for xylose-containing disaccharide, EIIB component No genes
Phosphotransferase system for xylose-containing disaccharide, EIIC component No genes
Phosphotransferase system for xylose-containing disaccharide, EIID component No genes
Possible alpha-xyloside ABC transporter, ATP-binding component No genes
Possible alpha-xyloside ABC transporter, permease component No genes
Possible alpha-xyloside ABC transporter, substrate-binding component No genes
Predicted xylose oligosaccharide ABC transporter, substrate-binding component No genes
Putative alpha-xylosidase (EC 3.2.1.-) No genes
Putative xylulose kinase (EC 2.7.1.17) No genes
Xylanase No genes
Xylonate dehydratase (EC 4.2.1.82) ABZR87_RS18260
Xylonolactonase (EC 3.1.1.68) ABZR87_RS18240
Xylose ABC transporter, ATP-binding component No genes
Xylose ABC transporter, periplasmic xylose-binding protein XylF ABZR87_RS18220
  ABZR87_RS23215
Xylose ABC transporter, permease component No genes
Xylose ABC transporter, permease protein XylH ABZR87_RS23225
Xylose ABC transporter, substrate-binding component No genes
Xylose activator XylR (AraC family) ABZR87_RS18215
Xylose isomerase (EC 5.3.1.5) No genes
Xylose oligosaccharides ABC transporter, ATP-binding protein 1 No genes
Xylose oligosaccharides ABC transporter, ATP-binding protein 2 No genes
Xylose oligosaccharides ABC transporter, permease protein 1 No genes
Xylose oligosaccharides ABC transporter, permease protein 2 No genes
Xylose oligosaccharides ABC transporter, sugar-binding protein No genes
Xylose-responsive transcription regulator, ROK family No genes
Xyloside transporter XynT No genes
Xylulose kinase (EC 2.7.1.17) ABZR87_RS18660
predicted 2-keto-3-deoxyxylonate dehydratase ABZR87_RS18245
predicted xylose isomerase No genes

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