SEED Subsystem: Oxidative stress in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein ABZR87_RS09090
Catalase (EC 1.11.1.6) ABZR87_RS01240
  ABZR87_RS21385
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR ABZR87_RS01425
  ABZR87_RS17260
Ferroxidase (EC 1.16.3.1) ABZR87_RS01245
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator ABZR87_RS01255
  ABZR87_RS07845
  ABZR87_RS18740
Iron-binding ferritin-like antioxidant protein ABZR87_RS01245
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) No genes
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR ABZR87_RS04615
NnrS protein involved in response to NO ABZR87_RS04625
Non-specific DNA-binding protein Dps ABZR87_RS01245
Organic hydroperoxide resistance protein ABZR87_RS03670
  ABZR87_RS16945
  ABZR87_RS22145
  ABZR87_RS22350
Organic hydroperoxide resistance transcriptional regulator ABZR87_RS03665
  ABZR87_RS22150
Paraquat-inducible protein A ABZR87_RS08265
  ABZR87_RS08270
Paraquat-inducible protein B ABZR87_RS08260
Peroxidase (EC 1.11.1.7) ABZR87_RS01240
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) ABZR87_RS02225
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) ABZR87_RS16195
Superoxide dismutase [Fe] (EC 1.15.1.1) ABZR87_RS00705
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR ABZR87_RS05090
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family ABZR87_RS03515
  ABZR87_RS17845
  ABZR87_RS18050
  ABZR87_RS20035
  ABZR87_RS20530
  ABZR87_RS22830
transcriptional regulator, Fur family No genes

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